Insertion junction: LMJ.RY0402.055332_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.055332
Chromosome:chromosome 5
Location:936505
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g247100 COPT1,COTH1 spore coat protein H; (1 of 3) PF08757 - CotH protein (CotH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAACGACGCGCGAGAGATTTAAAGCGT
Internal bar code:GATCTGGGAGATGTAACGCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:354
LEAP-Seq percent confirming:99.5074
LEAP-Seq n confirming:808
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGCATGTCACTTCAACC
Suggested primer 2:AAAAAGTCCACCCAGTCACG