Insertion junction: LMJ.RY0402.055397_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.055397
Chromosome:chromosome 17
Location:4040134
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g729101 PHC37 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Putative pherophorin-chlamydomonas homolog 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAGGCACGTACTCTTGCTCTTGCTAGAC
Internal bar code:AGTTGCCCTTTTATCTCTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:837
LEAP-Seq percent confirming:60.1114
LEAP-Seq n confirming:2806
LEAP-Seq n nonconfirming:1862
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCATTCATTTGCATGCTTTG
Suggested primer 2:CAGCTGTGAGAAGCTGCAAG