Insertion junction: LMJ.RY0402.055436_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.055436
Chromosome:chromosome 4
Location:1114172
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g216050 (1 of 3) PF08263//PF13855 - Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGAAGCCCCAGGCTGCTGTACGTGGAT
Internal bar code:ACGGTCCGGGGGGCTGTGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:562
LEAP-Seq percent confirming:99.4253
LEAP-Seq n confirming:173
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TATGGAGGTGTCGTGTGCAT
Suggested primer 2:GAGAGGTCCAACGTGAGGAG