Insertion junction: LMJ.RY0402.055527_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.055527
Chromosome:chromosome 4
Location:1720484
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g212500 CGL42 (1 of 6) PF09353 - Domain of unknown function (DUF1995) (DUF1995); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGTGGTGGCGCGGAAAGAACGGGTGGT
Internal bar code:CTCAGCTGCCTCCCGCGAAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:420
LEAP-Seq percent confirming:12.9891
LEAP-Seq n confirming:405
LEAP-Seq n nonconfirming:2713
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGAACAGCTAGCCTAATGCG
Suggested primer 2:GGTCGGTCAACTCGTTTTGT