Insertion junction: LMJ.RY0402.055607_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.055607
Chromosome:chromosome 3
Location:6016725
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g190900 (1 of 5) PTHR10351:SF42 - LD40663P 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCTTGCTGCAGCGACGCGGGGGCGGAG
Internal bar code:AGATGTGGCGGCTTAACCGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1182
LEAP-Seq percent confirming:99.6169
LEAP-Seq n confirming:9362
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGGAGACGGAGAAAATC
Suggested primer 2:CACAACAGGTTCCCACTTCC