Insertion junction: LMJ.RY0402.055694_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.055694
Chromosome:chromosome 16
Location:5754377
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g678600 (1 of 3) PTHR20961:SF0 - EGF DOMAIN-SPECIFIC O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAAAATATCGCGGGTTCGACACCAGGCGC
Internal bar code:AACCCTTCCGCTAGAGCCTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:735
LEAP-Seq percent confirming:99.5058
LEAP-Seq n confirming:3020
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGTGGTAAACACGCAGC
Suggested primer 2:GAAGCGAGCTCTTAGAGGCA