Insertion junction: LMJ.RY0402.055893_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.055893
Chromosome:chromosome 10
Location:2997799
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g440950 FAP192 (1 of 1) PTHR14465//PTHR14465:SF0 - IQ DOMAIN-CONTAINING PROTEIN H // IQ DOMAIN-CONTAINING PROTEIN H; Flagellar Associated Protein 192 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTTCTTGTGTGACACAAGGTGGAGGCC
Internal bar code:ATTCCCAATTGCTATTGAACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:765
LEAP-Seq percent confirming:99.6132
LEAP-Seq n confirming:515
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCAGGGTCTGTACAAGG
Suggested primer 2:GTGCCGTAGGAGTGTACGGT