Insertion junction: LMJ.RY0402.055941_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.055941
Chromosome:chromosome 12
Location:2407661
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g507200 (1 of 2) IPR000104//IPR003613 - Antifreeze protein, type I // U box domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGTGGGCTCAGCTCACGTTTCCCTTGC
Internal bar code:GTCCGACCCGGGTAGCGAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:940
LEAP-Seq percent confirming:98.45
LEAP-Seq n confirming:1969
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGAGAGGCACTGGACTG
Suggested primer 2:CAGTGGCGTTGCGTCTATAA