Insertion junction: LMJ.RY0402.056112_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.056112
Chromosome:chromosome 16
Location:284135
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g694201 (1 of 1) PTHR12461//PTHR12461:SF46 - HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED // SUBFAMILY NOT NAMED; Cupin- Jumonji-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGGAGGTCAAAGGGGTTATTGCGCGCGA
Internal bar code:GATCTTTACTAAAGAATATGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:644
LEAP-Seq percent confirming:99.4537
LEAP-Seq n confirming:11652
LEAP-Seq n nonconfirming:64
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TTATCACAGAGCAACGCGAC
Suggested primer 2:ACTTCAATGCACACACCCAA