Insertion junction: LMJ.RY0402.056181_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.056181
Chromosome:chromosome 1
Location:1533222
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g007901 (1 of 3) PTHR11206//PTHR11206:SF95 - MULTIDRUG RESISTANCE PROTEIN // MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN 3'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGGGGAAGCAAGTAGCTGATGTAGGCAT
Internal bar code:CCGAAGCCAAAGTATGCGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:639
LEAP-Seq percent confirming:98.6435
LEAP-Seq n confirming:2836
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGACGGTAGAAAAGCAGG
Suggested primer 2:CAGAAGACAGGTGCAAGCAA