Insertion junction: LMJ.RY0402.056331_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.056331
Chromosome:chromosome 16
Location:642518
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g691900 PUS19 RNA pseudouridine synthase; (1 of 1) PTHR11142:SF9 - TRNA PSEUDOURIDINE SYNTHASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTAATAGTTGGGTAAGAGAGGGTCCAACT
Internal bar code:TGGCGGCCCACAGTATTTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:711
LEAP-Seq percent confirming:29.1667
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:85
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGATCTTTTTCCCCTGC
Suggested primer 2:CAGGAGCATGGGATGAAGAT