Insertion junction: LMJ.RY0402.056340_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.056340
Chromosome:scaffold 18
Location:152376
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre18.g749197 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTTGGGGGGTGTCGACAGCTAGGTGTTT
Internal bar code:GACATCGAGAACGCGTGTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:665
LEAP-Seq percent confirming:99.5042
LEAP-Seq n confirming:4817
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AACGTACGGTGTGAACACGA
Suggested primer 2:TCAGGAGACTGCGAACACAC