Insertion junction: LMJ.RY0402.056361_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.056361
Chromosome:chromosome 4
Location:2850757
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g224300 CGL84 (1 of 22) PTHR10994 - RETICULON; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACTCGTCATCAACGCTTATGAGATGCC
Internal bar code:TAATCAAATGCCAGGCATTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:908
LEAP-Seq percent confirming:99.4628
LEAP-Seq n confirming:1111
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTCTGGTTGGAAATGACG
Suggested primer 2:CGTGTGACATGAACCGGTAG