Insertion junction: LMJ.RY0402.056425_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.056425
Chromosome:chromosome 9
Location:3651513
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g390467 CGL66 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCGACGCACCTCCGTCCTTCGACCTGG
Internal bar code:GAGGGGCATTGGCGGCGGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:651
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:134
LEAP-Seq n nonconfirming:67
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AACGGTCTGGGCCTAAACTT
Suggested primer 2:ATGCCGGTGAGAGAGAGAGA