Insertion junction: LMJ.RY0402.056446_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.056446
Chromosome:chromosome 3
Location:2776617
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g161950 (1 of 26) IPR011990 - Tetratricopeptide-like helical domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCGCATAGTCACAACAGTGTTGCGGTG
Internal bar code:TCCGGACGGCCTTGGACTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:492
LEAP-Seq percent confirming:87.601
LEAP-Seq n confirming:38173
LEAP-Seq n nonconfirming:5403
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:CGTATGCTGGGTATGACACG
Suggested primer 2:AATAGGGAGACCGTGTGTGC