Insertion junction: LMJ.RY0402.056467_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.056467
Chromosome:chromosome 3
Location:5928144
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g190150 CGL1 (1 of 2) PF11833 - Protein of unknown function (DUF3353) (DUF3353); Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGACTGAAGGGACTAGAGTGTCAGGGCC
Internal bar code:TCTTCGGTTGTTAGGGCCCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:813
LEAP-Seq percent confirming:98.4733
LEAP-Seq n confirming:129
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAGACCGAAACGAAAAGCTG
Suggested primer 2:CTTCGATTTCGAGAGTTGCC