Insertion junction: LMJ.RY0402.056469_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.056469
Chromosome:chromosome 2
Location:4161179
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre02.g098200 CGL103,PRT1 (1 of 1) PF00569//PF13920 - Zinc finger, ZZ type (ZZ) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3); Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACCGGGCCTCTTCATCCTCTTCCCTGGC
Internal bar code:CCCAGCGCGCTTCTTCCACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:681
LEAP-Seq percent confirming:99.8856
LEAP-Seq n confirming:6982
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCACAAGAAGAGCCAGC
Suggested primer 2:GCACTCGTCGCAGATTTACA