Insertion junction: LMJ.RY0402.056574_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.056574
Chromosome:chromosome 1
Location:1979521
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g010700 SYP2 Endosomal Qa-SNARE protein, Syntaxin7/Syx7/Pep12/Syp2-family (Qa.III.b); (1 of 1) PF14523 - Syntaxin-like protein (Syntaxin_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACGTTGCGGCCCAACGCCCCCTTGGAC
Internal bar code:GCAGAACGTATAACTATAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:567
LEAP-Seq percent confirming:99.6785
LEAP-Seq n confirming:930
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCATTCGGTTTGGTTTA
Suggested primer 2:TCCTTTTCGGTCATGTAGGG