Insertion junction: LMJ.RY0402.056579_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.056579
Chromosome:chromosome 3
Location:5114241
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g181650 (1 of 1) PTHR20973//PTHR20973:SF0 - NON-SMC ELEMENT 1-RELATED // NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 1 HOMOLOG 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTAAGGAATTTGGTCAAAGGAGTCGTCC
Internal bar code:TTGGCTTCCAGATAAGTCAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:625
LEAP-Seq percent confirming:99.1886
LEAP-Seq n confirming:978
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTCGGTGTGGTAGTCG
Suggested primer 2:TTGCTTGAGCGGAAGGTAGT