Insertion junction: LMJ.RY0402.056734_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.056734
Chromosome:chromosome 1
Location:2669389
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g015600 (1 of 1) PTHR23346//PTHR23346:SF7 - TRANSLATIONAL ACTIVATOR GCN1-RELATED // TRANSLATIONAL ACTIVATOR GCN1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCAAACCCCCAAAAGGAGGCGCTAGCG
Internal bar code:GTAGGGGCGGCGATTTTCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:338
LEAP-Seq percent confirming:88.9768
LEAP-Seq n confirming:1687
LEAP-Seq n nonconfirming:209
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCCTCGTCTGTGAGCTTC
Suggested primer 2:CCTTCCTCAAGTGCCTCAAC