Insertion junction: LMJ.RY0402.056850_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.056850
Chromosome:chromosome 11
Location:138636
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467541 (1 of 3) PTHR13780//PTHR13780:SF49 - AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCAGGCTTGGGGTGTGGGCGCTGGGTGG
Internal bar code:GCTTTTAGTAGCTTCGTAGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1372
LEAP-Seq percent confirming:99.6804
LEAP-Seq n confirming:2807
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGACAGACACATGCAGCGAC
Suggested primer 2:AGGCAGCAGGAGAAAGACAG