Insertion junction: LMJ.RY0402.057250_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.057250
Chromosome:chromosome 9
Location:2422192
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g391500 ATG9 (1 of 1) K17907 - autophagy-related protein 9 (ATG9); Autophagy related 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTACCTCCGTGGTTTTGTGACGCGGCAG
Internal bar code:GCGGCTAGAAAAACAATACCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:523
LEAP-Seq percent confirming:99.5864
LEAP-Seq n confirming:10834
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCAACACATGCGTAATC
Suggested primer 2:GTAGCGTGTCCGTTACCGTT