Insertion junction: LMJ.RY0402.057321_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.057321
Chromosome:chromosome 9
Location:3805361
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g391615 (1 of 80) IPR003882 - Pistil-specific extensin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCGTTCCGGCAAGCCGCAGTAGTGTGC
Internal bar code:CAGTATAACAGAGTTAAGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:867
LEAP-Seq percent confirming:97.6823
LEAP-Seq n confirming:2866
LEAP-Seq n nonconfirming:68
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCCACATAAGAAAGGTGG
Suggested primer 2:CCGTTTCAGTCTGCTGTCAA