Insertion junction: LMJ.RY0402.057335_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.057335
Chromosome:chromosome 17
Location:1523384
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g707200 LIC2 (1 of 5) PF02931 - Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD); Ligand-gated ion channel 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGCCGCAACCACAAATGCGCTATATTGA
Internal bar code:CGAGGGGGACCGCATCCGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:997
LEAP-Seq percent confirming:99.0045
LEAP-Seq n confirming:4177
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGCACACCACCTTGTAG
Suggested primer 2:GAAGTACAGGAGCTTTGCGG