Insertion junction: LMJ.RY0402.057647_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.057647
Chromosome:chromosome 3
Location:4505663
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g176325 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTTCCGGAAATCGTCGACGCTGCAAACA
Internal bar code:AGGTCTGGGACGATTCTCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:683
LEAP-Seq percent confirming:80.7968
LEAP-Seq n confirming:3387
LEAP-Seq n nonconfirming:805
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCAGGGAAGTGAACGAA
Suggested primer 2:AGAGGGGTTCCAGTGCCTAT