Insertion junction: LMJ.RY0402.057939_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.057939
Chromosome:chromosome 17
Location:3665554
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g726650 CGL96 (1 of 1) K14839 - nucleolar protein 16 (NOP16); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTAGGTGCACACGTGCAGGTGTGAGTA
Internal bar code:GGGGCAGATCAAGCGGATGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:872
LEAP-Seq percent confirming:97.3963
LEAP-Seq n confirming:3404
LEAP-Seq n nonconfirming:91
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TGACCAGAGAACGCAGTGTC
Suggested primer 2:CCCAACTCCAAACACGACTT