Insertion junction: LMJ.RY0402.057983_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.057983
Chromosome:chromosome 14
Location:2528103
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre14.g625350 MAE17 MATE efflux family protein; (1 of 3) PTHR11206:SF95 - MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTAACCCTGAACGCACTTTCCCTATCCC
Internal bar code:GCTTACGCTGATGAAGTTAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:179
LEAP-Seq percent confirming:78.3813
LEAP-Seq n confirming:2179
LEAP-Seq n nonconfirming:601
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACATAGCTTGTCGTCGC
Suggested primer 2:ATCTCATTCTCGTTCGTGGG