Insertion junction: LMJ.RY0402.058131_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.058131
Chromosome:chromosome 11
Location:568409
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467608 (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCAGGTTCACACCCGCGCCCTCGCCCGG
Internal bar code:CCGGAAGTGTGCCGGACTTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:747
LEAP-Seq percent confirming:74.3167
LEAP-Seq n confirming:1713
LEAP-Seq n nonconfirming:592
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGACAGGGTGGTAGTCA
Suggested primer 2:CGCAGCTACACCACATGAAC