Insertion junction: LMJ.RY0402.058203_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.058203
Chromosome:chromosome 14
Location:2524948
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre14.g625350 MAE17 MATE efflux family protein; (1 of 3) PTHR11206:SF95 - MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGCAGTGGTGGGAGTACGGCGAGCAGG
Internal bar code:TCGTGGCGTATAAGCCACAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:499
LEAP-Seq percent confirming:97.6148
LEAP-Seq n confirming:1105
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACCGACGTTTACCCTAA
Suggested primer 2:TGGGTCTGGGTCTAGGTTTG