Insertion junction: LMJ.RY0402.058225_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.058225
Chromosome:chromosome 3
Location:8219914
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g199800 HYD1,HYDA1 (1 of 2) 1.12.7.2 - Ferredoxin hydrogenase / Uptake hydrogenase; Iron hydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTGCGCGTGCGCCGTTTCAGGCGGTGAT
Internal bar code:CGTACACGGTCGTAGTTTCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1153
LEAP-Seq percent confirming:99.8369
LEAP-Seq n confirming:4286
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCATCGCACCACCTATT
Suggested primer 2:CCGTAGGCACGTACATGTTG