Insertion junction: LMJ.RY0402.058277_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.058277
Chromosome:chromosome 3
Location:3432793
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g167200 (1 of 1) PTHR23097//PTHR23097:SF107 - TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTACACTGTATCAAACGCACCCAAGTTCG
Internal bar code:CCGGTACAAGCCTCGACGGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:486
LEAP-Seq percent confirming:80.7158
LEAP-Seq n confirming:3428
LEAP-Seq n nonconfirming:819
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATCCGAACTGTTTTTGC
Suggested primer 2:ATCACAGGTGAGGTGGAAGC