Insertion junction: LMJ.RY0402.058418_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.058418
Chromosome:chromosome 16
Location:2912215
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g663850 SSS5 Soluble starch synthase V; (1 of 2) PTHR12526//PTHR12526:SF304 - GLYCOSYLTRANSFERASE // STARCH SYNTHASE 4, CHLOROPLASTIC/AMYLOPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGCCGCACCCGCCACCCCACTCTTTGC
Internal bar code:CGAAGGTTCTGCAAGCAGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:833
LEAP-Seq percent confirming:98.8924
LEAP-Seq n confirming:1875
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TTTAATTTACAGCACGGCCC
Suggested primer 2:TTATGAGCAGGTTGCACTCG