Insertion junction: LMJ.RY0402.058504_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.058504
Chromosome:chromosome 12
Location:5764683
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g533250 (1 of 2) IPR000104//IPR001394//IPR028889 - Antifreeze protein, type I // Peptidase C19, ubiquitin carboxyl-terminal hydrolase // Ubiquitin specific protease domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCTCACCAGCTCCCACGCCGGCGCCCA
Internal bar code:GAGGCTTGCGGCCAGGACATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:356
LEAP-Seq percent confirming:91.512
LEAP-Seq n confirming:3353
LEAP-Seq n nonconfirming:311
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGCTCGGAAGCTCGTGAT
Suggested primer 2:GATTGGGTGGGACATAGGTG