Insertion junction: LMJ.RY0402.058685_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.058685
Chromosome:chromosome 12
Location:51746
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g483650 STL1 (1 of 3) PTHR11584:SF316 - SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC; Ser-Thr protein kinase, paralog of STT7 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTCGCATGACTGGCCACCCCCTTGACTC
Internal bar code:CGGGCCTGTCGCCCGGTCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:389
LEAP-Seq percent confirming:98.2877
LEAP-Seq n confirming:2296
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCATGAATACGCTGCGA
Suggested primer 2:CCCAAGAACAGAACGTCCAT