Insertion junction: LMJ.RY0402.059044_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.059044
Chromosome:chromosome 5
Location:2611641
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g236250 Conserved WD40-repeat Protein; (1 of 2) PTHR22847//PTHR22847:SF459 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGAACGCCAGACAAGCCAGGGTGGTCT
Internal bar code:GGGCCCTTATAGGTTGACCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:265
LEAP-Seq percent confirming:57.617
LEAP-Seq n confirming:1354
LEAP-Seq n nonconfirming:996
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCAAGGTATGTGCAATCT
Suggested primer 2:ATCCTCCTCCTCCTCGTCAT