Insertion junction: LMJ.RY0402.059249_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.059249
Chromosome:chromosome 3
Location:6288957
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g193050 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCAGTCGGCCTCCCGCACCGCTCCCAAC
Internal bar code:CCGCGGGCACGGCCCGCCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:166
LEAP-Seq percent confirming:62.1777
LEAP-Seq n confirming:434
LEAP-Seq n nonconfirming:264
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGGACGTGGATGAGACT
Suggested primer 2:CTAGCTCGGTGGACTTCCTG