Insertion junction: LMJ.RY0402.059336_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.059336
Chromosome:chromosome 9
Location:7683791
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g415500 TCA1 Translation factor for chloroplast petA RNA CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTCCTGCTCCTGGCATCCTCAGCGCCA
Internal bar code:TCACACGCGTAGAAGCGCTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:325
LEAP-Seq percent confirming:90.6032
LEAP-Seq n confirming:1427
LEAP-Seq n nonconfirming:148
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGTGTATGCGACTCTGG
Suggested primer 2:GACCTGCACGAGCTGTATCA