Insertion junction: LMJ.RY0402.059528_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.059528
Chromosome:chromosome 5
Location:2886243
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g238000 (1 of 3) IPR006502//IPR011705 - Protein of unknown function PDDEXK-like // BTB/Kelch-associated intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCTGCAGGTGGATGGCTGCCAAGTACG
Internal bar code:TAATATCATGCGCATTCTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:982
LEAP-Seq percent confirming:99.3158
LEAP-Seq n confirming:3629
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTCGTGCTATCCGAAAT
Suggested primer 2:CGAGCTTGTTGTCAATCGAA