Insertion junction: LMJ.RY0402.059738_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.059738
Chromosome:chromosome 17
Location:3030857
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g720550 (1 of 1) PTHR34202:SF1 - UPF0548 PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGAACACAGCACATGAGCGGAGAGGTGT
Internal bar code:GGGCGACTCCTGCGGGCATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:795
LEAP-Seq percent confirming:93.8034
LEAP-Seq n confirming:6040
LEAP-Seq n nonconfirming:399
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTAGTGCGGGCATTAGT
Suggested primer 2:CCACTGGTACCTGCCAAACT