Insertion junction: LMJ.RY0402.059970_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.059970
Chromosome:chromosome 17
Location:3698930
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g726950 (1 of 1) PTHR11042//PTHR11042:SF102 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED // INTERFERON-INDUCED, DOUBLE-STRANDED RNA-ACTIVATED PROTEIN KINASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAGCTGACACGCGCGTGCCCCTGTCACC
Internal bar code:GACTTTCTCCGTACGGAAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:22
LEAP-Seq percent confirming:69.3333
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGCTAAGGAGCAATGCG
Suggested primer 2:CTGGGAAGTGGAAGAGCAAG