Insertion junction: LMJ.RY0402.060025_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.060025
Chromosome:chromosome 9
Location:2532079
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390957 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCGGCCAAACACGAAGTAAGCCAGCGT
Internal bar code:CTGTTCCCGGAGGAGGTCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:611
LEAP-Seq percent confirming:99.433
LEAP-Seq n confirming:6839
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGTACCTCCTTCTGGCA
Suggested primer 2:TGAGGGAGGAATACACGGAC