Insertion junction: LMJ.RY0402.060109_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.060109
Chromosome:chromosome 9
Location:1245438
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g399550 (1 of 1) PTHR10857//PTHR10857:SF11 - COPINE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAACGTTCACAGCTGGCGGTTGAGTCCTA
Internal bar code:TCGGCGAGGACTGTTGCGTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1073
LEAP-Seq percent confirming:99.5932
LEAP-Seq n confirming:1224
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AATGGGAAGTGCATAAACGC
Suggested primer 2:TGTATGATGACACGCTGGGT