Insertion junction: LMJ.RY0402.060166_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.060166
Chromosome:chromosome 16
Location:2375187
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g659950 PRPS5 Chloroplast Ribosomal Protein S5; (1 of 2) K02988 - small subunit ribosomal protein S5 (RP-S5, MRPS5, rpsE) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCAACGACGCGCGATGCGTTTGCTGAGG
Internal bar code:GCTAGGGAGGATGCCTCAGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:667
LEAP-Seq percent confirming:80.0587
LEAP-Seq n confirming:273
LEAP-Seq n nonconfirming:68
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCGCAAGACTGATTGACT
Suggested primer 2:CAGCCGGTCATAAACCTTGT