Insertion junction: LMJ.RY0402.060196_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.060196
Chromosome:chromosome 17
Location:5407011
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g736750 (1 of 2) PTHR22640//PTHR22640:SF2 - UNCHARACTERIZED // STRUCTURAL MAINTENANCE OF CHROMOSOMES FLEXIBLE HINGE DOMAIN-CONTAINING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCCCCCCTGTGCTGAGACCCCGCGGAC
Internal bar code:ACGGAGCTCGGGGTGGAGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:865
LEAP-Seq percent confirming:88.5832
LEAP-Seq n confirming:3445
LEAP-Seq n nonconfirming:444
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACATGATTGTGGCTGGA
Suggested primer 2:CCCACGAGTGACAACTTCAA