Insertion junction: LMJ.RY0402.060286_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.060286
Chromosome:chromosome 1
Location:4719076
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g032550 CGL127 (1 of 1) K11267 - sister chromatid cohesion protein PDS5 (PDS5); Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTGGGTGGGTGTGCCACGTCAGCGCAC
Internal bar code:TCCACGAGCTGCCACACCGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:576
LEAP-Seq percent confirming:99.9059
LEAP-Seq n confirming:2124
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGGTGTGTCCTTCTCGT
Suggested primer 2:GATTAACCCTTGGGATGCCT