Insertion junction: LMJ.RY0402.060421_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.060421
Chromosome:chromosome 5
Location:1457610
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g244000 (1 of 1) IPR000253//IPR009836 - Forkhead-associated (FHA) domain // Protein of unknown function DUF1399 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGCTGTTGTTTAAAAACGTTGCTTTGG
Internal bar code:TGGGATCTGACGTGACATGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1046
LEAP-Seq percent confirming:99.319
LEAP-Seq n confirming:4813
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TACCTCAGCGTGGCACATAG
Suggested primer 2:TCTAGTCGGGTTTCGGAATG