Insertion junction: LMJ.RY0402.060576_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.060576
Chromosome:chromosome 12
Location:4861699
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g525100 SMC6B (1 of 2) PTHR19306//PTHR19306:SF6 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // PROTEIN C23H4.6, ISOFORM A-RELATED; Structural Maintenance of Chromosomes protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCTCCACCGACGCCCCACGAAAAGTTGC
Internal bar code:ATGGAGGCAGAGGGAGCAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:797
LEAP-Seq percent confirming:98.2098
LEAP-Seq n confirming:5102
LEAP-Seq n nonconfirming:93
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTACGAACTCGTTCCAAT
Suggested primer 2:GCATCAAGCAAGGTCAGTCA