Insertion junction: LMJ.RY0402.060622_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.060622
Chromosome:chromosome 3
Location:7299779
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g206950 (1 of 1) PF05183 - RNA dependent RNA polymerase (RdRP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGATGCAGGGCAGGCGGCCGCTGCGACA
Internal bar code:ACCCAGGATGCAGGCGGAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:505
LEAP-Seq percent confirming:73.6531
LEAP-Seq n confirming:18073
LEAP-Seq n nonconfirming:6465
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGCCTCGGTGTGTGTTA
Suggested primer 2:GCTACATGAGGGCTTTCGAG