Insertion junction: LMJ.RY0402.060645_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.060645
Chromosome:chromosome 9
Location:2394990
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g391753 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGTCGCTGTCACATCCCCGCAGTCCCTA
Internal bar code:GCGCATGTCTACCATGCGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:910
LEAP-Seq percent confirming:97.4322
LEAP-Seq n confirming:683
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGAACCGTACAGCGTAT
Suggested primer 2:GCTATCTTCGGTGTGGGTGT