Insertion junction: LMJ.RY0402.060766_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.060766
Chromosome:scaffold 19
Location:153779
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre19.g750947 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTATTTACCATCATAGTCGTGTTGTGGA
Internal bar code:CTTGTGCATGCGCAGCCTTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:433
LEAP-Seq percent confirming:94.0148
LEAP-Seq n confirming:4571
LEAP-Seq n nonconfirming:291
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCAAATCCAGATAGCCA
Suggested primer 2:AGGCTCTGCAGCTGTTCTTC